JBrowseReactLinearGenomeViewSessionModel

Auto-generated from the @jbrowse/mobx-state-tree model in the source — see the developer guide for concepts. View source.

The shared EmbeddedSessionMixin plus this product's tracks mixin, its single LinearGenomeView, and disableAddTracks, which is a root prop rather than a session one. The mixin and the view are spelled out here rather than passed to a shared factory because types.compose cannot infer through a generic — see EmbeddedSessionMixin.

Each section ends with the members a composed model contributes, linked to the page that documents them.

Properties

Member	Description
view `view: pluginManager.getViewType('LinearGenomeView').stateModel`

16 inherited properties from 4 models

From BaseSessionModel: id, name, focusedViewId, highlights, highlightsVisible, highlightLabelsVisible, heldForMissingPlugins

From DrawerWidgetSessionMixin: drawerPosition, drawerWidth, widgets, activeWidgets, minimized

From ConnectionManagementSessionMixin: connectionInstances, connectionTrackConfigs

From SessionTracksManagerSessionMixin: sessionTracks, trackConfigDeltas

Volatiles

10 inherited volatiles from 5 models

From BaseSessionModel: selection, hovered, queueOfDialogs, preferencesOverrides

From SnackbarModel: snackbarMessages, errorDialog

From DrawerWidgetSessionMixin: poppedOut, modalWidgets

From EmbeddedSessionThemeMixin: sessionThemeMode

From SessionTracksManagerSessionMixin: editableTrackConfigs

Getters

Member Description

disableAddTracks
boolean

Member	Description
disableAddTracks `boolean`
views (ModelInstanceTypeProps<…> & {…} & {…} & {…} & {…} & {…} & {…} & {…} & {…} & {…} & {…} & {…} & {…} & {…} & {…} & {…} & {…} & {…} & {…} & {…} & {…} & {…} & {…} & {…} & {…} & {…} & { rubberbandClickMenuItems(clickOffset: BpOffset): MenuItem[]; highlightMenuItems(_highlight: HighlightType): MenuItem[]; } & { flyTo: (centerBp: number, windowWidthBp: number) => void; flyToCenter(coord: number, refName: string, displayedRegionIndex?: number \| undefined): void; flyToFit(centerBp: number, fitWidthBp: number): void; } & { afterCreate(): void; afterAttach(): void; } & IStateTreeNode<…>)[]
stickyViewHeaders `boolean`	Pin the header, and scroll the tracks under it, whenever the view is bounded -- which is the only time it means anything, since an unbounded view scrolls with the host's page and has nothing of its own to pin against. The LGV model reads this off the session (`stickyViewHeaders === true`) and so does the embedded view title above it, the same two readers the web app has.

views

(ModelInstanceTypeProps<…> & {…} & {…} & {…} & {…} & {…} & {…} & {…} & {…} & {…} & {…} & {…} & {…} & {…} & {…} & {…} & {…} & {…} & {…} & {…} & {…} & {…} & {…} & {…} & {…} & {…} & { rubberbandClickMenuItems(clickOffset: BpOffset): MenuItem[]; highlightMenuItems(_highlight: HighlightType): MenuItem[]; } & { flyTo: (centerBp: number, windowWidthBp: number) => void; flyToCenter(coord: number, refName: string, displayedRegionIndex?: number | undefined): void; flyToFit(centerBp: number, fitWidthBp: number): void; } & { afterCreate(): void; afterAttach(): void; } & IStateTreeNode<…>)[]

stickyViewHeaders
boolean Pin the header, and scroll the tracks under it, whenever the view is bounded -- which is the only time it means anything, since an unbounded view scrolls with the host's page and has nothing of its own to pin against. The LGV model reads this off the session (stickyViewHeaders === true) and so does the embedded view title above it, the same two readers the web app has.

28 inherited getters from 7 models

From EmbeddedSessionMixin: viewTitleBars, version, assemblyNames, assemblyManager

From BaseSessionModel: root, jbrowse, rpcManager, configuration, adminMode, textSearchManager, assemblies, DialogComponent, DialogProps, animationMode, scrollZoom, numberGrouping

From SnackbarModel: snackbarMessageSet

From DrawerWidgetSessionMixin: visibleWidget, drawerVisible, modalWidgetVisible

From ConnectionManagementSessionMixin: connections

From EmbeddedSessionThemeMixin: themeOptions, palette, styleTheme, theme

From SessionTracksManagerSessionMixin: trackBasesById, tracks, promotableTrackIds

Methods

15 inherited methods from 6 models

From BaseSessionModel: getPreferenceDefault, getPreference, getPreferenceChanges

From ReferenceManagementSessionMixin: getReferringMultiple, getReferring

From TrackMenuSessionMixin: getTrackListMenuItems, getTrackActionMenuItems

From EmbeddedSessionThemeMixin: getActiveThemeOptions

From SessionTracksManagerSessionMixin: withTrackEdits, baseTrackConfig, getEditableTrackConfig, getTrackConfigChanges, isTrackOverride

From TracksManagerSessionMixin: getTrackById, getTracksById

Actions

Member Description

Member	Description
addView <N extends string>(typeName: N, initialState?: NoInfer<…> \| undefined) => ModelInstanceTypeProps<…> & {…} & {…} & {…} & {…} & {…} & {…} & {…} & {…} & {…} & {…} & {…} & {…} & {…} & {…} & {…} & {…} & {…} & {…} & {…} & {…} & {…} & {…} & {…} & {…} & {…} & {…} & { flyTo: (centerBp: number, windowWidthBp: number) => void; flyToCenter(coord: number, refName: string, displayedRegionIndex?: number \| undefined): void; flyToFit(centerBp: number, fitWidthBp: number): void; } & { afterCreate(): void; afterAttach(): void; } & IStateTreeNode<…>
removeView `() => void`
launchView `(typeName: string, initialState?: any) => Promise<…>`	same as addView — the single view type here is always eagerly registered, so there is nothing to load; async to satisfy the AbstractViewContainer contract

addView

<N extends string>(typeName: N, initialState?: NoInfer<…> | undefined) => ModelInstanceTypeProps<…> & {…} & {…} & {…} & {…} & {…} & {…} & {…} & {…} & {…} & {…} & {…} & {…} & {…} & {…} & {…} & {…} & {…} & {…} & {…} & {…} & {…} & {…} & {…} & {…} & {…} & {…} & { flyTo: (centerBp: number, windowWidthBp: number) => void; flyToCenter(coord: number, refName: string, displayedRegionIndex?: number | undefined): void; flyToFit(centerBp: number, fitWidthBp: number): void; } & { afterCreate(): void; afterAttach(): void; } & IStateTreeNode<…>

removeView
() => void

launchView
(typeName: string, initialState?: any) => Promise<…> same as addView — the single view type here is always eagerly registered, so there is nothing to load; async to satisfy the AbstractViewContainer contract

59 inherited actions from 7 models

From BaseSessionModel: setSelection, clearSelection, setHovered, setHighlightsVisible, setHighlightLabelsVisible, addHighlight, removeHighlight, updateHighlight, setHighlights, setPreferenceOverride, clearPreferenceOverrides, clearPreferenceOverride, setScrollZoom, setName, setFocusedViewId, removeActiveDialog, queueDialog, removeDialog